Browse our high quality whole exome NGS data sets. Download variant caller format (VCF) files for our NGS products in both gDNA and cfDNA formats to detect false positives and confirm true positives in your own data sets. See our blog on how this data was generated and how you can use it.
VCFs are large (>200MB) text-based files that can be opened using your favorite bioinformatic analysis software (e.g. bedtools, VCFtools, etc.). Alternatively, they can be unzipped using a tool like 7-Zip and then opened using a text editor (e.g. Sublime Text, Notepad++, etc.). Our FFPE data is downloadable in an excel format.
gDNA reference standards
| Catalog number | Description | HG19 exome data | HG38 exome data |
|---|---|---|---|
| HD802 | EGFR Gene-Specific Multiplex | Download | Download |
| HD753 | Structural Multiplex | Download | Download |
| HD793 | BRCA Germline I | Download | Download |
| HD795 | BRCA Somatic Multiplex I | Download | Download |
| HD829 | Myeloid | Download | Download |
| Catalog number | Description | HG19 exome data | HG38 exome data |
| HD752 | Tru-Q 0 (100% Wildtype) | Download | Download |
| HD728 | Tru-Q 1 | Download | Download |
| HD729 | Tru-Q 2 | Download | Download |
| HD730 | Tru-Q 3 | Download | Download |
| HD731 | Tru-Q 4 | Download | Download |
| HD734 | Tru-Q 7 | Download | Download |
FFPE reference standards
| Catalog number | Description | Exome data file |
|---|---|---|
| HD200 | Quantitative Multiplex | Download data |
| HD301 | KRAS Quantitative Multiplex | Download data |
| HD300 | 5% EGFR Quantitative Multiplex | Download data |
cfDNA reference standards
| Catalog number | Description | HG19 exome data | HG38 exome data |
|---|---|---|---|
| HD780 | Multiplex I cfDNA set (contains HD776 and HD777) | ||
| HD776 | 100% Multiplex I Wild Type | Download | Download |
| HD777 | 5% Multiplex I | Download | Download |