- Engineered cell lines
- HAP1 parental cell lines
HAP1 parental cell lines
Confirm your results with matched parental HAP1 cell lines
Why are HAP1 cells an ideal option for gene-edited cell line models?
Our HAP1 cell line database represents the synergy of two great systems: the amenability of HAP1 cells to gene editing and the precise gene editing capabilities of the CRISPR-Cas9 system. HAP1 is a near-haploid human cell line derived from the KBM-7 chronic myelogenous leukemia (CML) cell line. KBM-7 cells were derived from a male patient but lack a Y chromosome, thus containing a single X chromosome when in the haploid state. HAP1 cells tend to spontaneously diploidize over time. Additional monitoring of ploidy status and QC is necessary when fully haploid cultures are required. We offer several options for HAP1-related parental cell lines, summarized below. For more details on how the HAP1 cell line was created, their full genotype, and the additional QC recommended for assessment of ploidy status please see Beigl et al.
See our HAP1 publication list to see how the cell line has been applied for a wide range of biological processes and assays, such as DNA damage repair pathway, stress responses, disease modeling as well as antibody validation.
Parental Cell line (Catalog Number) | Fully Haploid Genetic Background | Duplication of Chr15 | Extra Chr8 | Screened for Ploidy Status |
---|---|---|---|---|
HAP1 (C631) | ||||
HAP1 screening ready (C859) | ||||
eHAP (C669) | ||||
KBM-7 (C628) |
Parental cell line details
Human HAP1 Parental Cell Line (catalog number C631)
- Wild-type HAP1 cells
- Near haploid genetic background
- Duplication of a portion of Chr 15
- Not selected for ploidy status
- Will have haploid and diploid populations
- Parental cell line for our collection of HAP1 knockout cell lines
- Included with all KO cell lines as the parental control
Human HAP1 parental cell line - screening ready (catalog number C859)
- Wild-type HAP1 cells
- Near haploid genetic background
- Duplication of a portion of Chr 15
- Selected for ploidy status
Human eHAP cell line (catalog number C669)
- Fully-haploid engineered HAP1 (eHAP) cells
- Engineered to remove the fragment of chromosome 15 from chromosome 19
- No genes are duplicated in this cell line
- Has the Philadelphia chromosome
- Not screened for ploidy status
- Will have haploid and diploid populations
Limited use agreement
All cell lines engineered by Horizon Discovery are purchased under the terms of our Limited Use Label License.
References
For more information about how the HAP1 cell line was generated, see:
- Kotecki, M., Reddy, P. S. & Cochran, B. Isolation and Characterization of a Near-Haploid Human Cell Line. Experimental Cell Research 252, 273–280 (1999). DOI: 10.1006/excr.1999.4656
- Carette, J. E. et al. Haploid Genetic Screens in Human Cells Identify Host Factors Used by Pathogens. Science 326, 1231–1235 (2009). DOI: 10.1126/science.1178955
- Carette, J. E. et al. Ebola virus entry requires the cholesterol transporter Niemann–Pick C1. Nature 477, 340–343 (2011). DOI: 10.1038/nature10348
- Essletzbichler, P. et al. Megabase-scale deletion using CRISPR/Cas9 to generate a fully haploid human cell line. Genome Res 24, 2059–2065 (2014). DOI: 10.1101/gr.177220.114
- Dong, M. et al. DAG1 mutations associated with asymptomatic hyperCKemia and hypoglycosylation of α-dystroglycan. Neurology 84, 273–279 (2015). DOI: 10.1212/WNL.0000000000001162
- Kravtsova-Ivantsiv, Y. et al. KPC1-mediated ubiquitination and proteasomal processing of NF-κB1 p105 to p50 restricts tumor growth. Cell 161, 333–347 (2015). DOI: 10.1016/j.cell.2015.03.001
- Lackner, D. H. et al. A generic strategy for CRISPR-Cas9-mediated gene tagging. Nat Commun 6, 10237 (2015). DOI: 10.1038/ncomms10237
- Beigl et al. Efficient and crucial quality control of HAP1 cell ploidy status. Biology Open. 2020
For information on the KBM-7 cell line, see:
- Andersson, B. S. et al. Ph-positive chronic myeloid leukemia with near-haploid conversion in vivo and establishment of a continuously growing cell line with similar cytogenetic pattern. Cancer Genet Cytogenet 24, 335–343 (1987). DOI: 10.1016/0165-4608(87)90116-6